STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FC74Carbamoyltransferase. (185 aa)    
Predicted Functional Partners:
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
  
 
 0.871
A0A2P5AXL7
HAD hydrolase, subfamily IA.
  
 
 0.665
A0A2P5FF48
HAD hydrolase, subfamily IA.
  
 
 0.665
A0A2P5FCG5
DNA repair protein Rad50.
   
   0.641
A0A2P5AHE8
HAD hydrolase, subfamily IA.
  
 
  0.624
MLO
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death.
  
 
  0.624
A0A2P5BSS0
HAD hydrolase, subfamily IA.
  
 
  0.624
A0A2P5BSX5
HAD hydrolase, subfamily IA.
  
 
  0.624
TorNAC44
NAC domain containing protein.
  
 
  0.624
MLO-3
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death.
  
 
  0.624
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.