STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FCS5Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (977 aa)    
Predicted Functional Partners:
A0A2P5FQV1
DNA mismatch repair protein.
   
 0.989
A0A2P5FFJ4
DNA mismatch repair protein.
   
 0.974
A0A2P5ER53
Fanconi anaemia protein FANCD.
    
 0.955
A0A2P5FB01
Tify domain containing protein.
    
 0.955
TorJAZ5
Jasmonate-zim domain protein.
    
 0.955
A0A2P5EB22
DNA mismatch repair protein.
   
 0.923
A0A2P5ES59
Fanconi anemia group I protein.
    
 0.863
A0A2P5BQX9
DNA repair protein.
    
 0.843
A0A2P5FX99
Uncharacterized protein.
   
 
 0.825
A0A2P5C696
ERCC1/RAD10/SWI10 family.
     
 0.793
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.