STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FDE1Dullard phosphatase domain. (299 aa)    
Predicted Functional Partners:
A0A2P5F0P4
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.889
A0A2P5E191
Lipin.
    
 0.770
A0A2P5FXF7
Lipin.
    
 0.770
A0A2P5C3F0
Mitochondrial import inner membrane translocase subunit.
    
 0.699
A0A2P5ENG4
Mitochondrial inner membrane translocase subunit.
    
 0.676
A0A2P5FEH5
Mitochondrial inner membrane translocase subunit.
    
 0.676
A0A2P5FBF2
DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site.
    
 0.666
A0A2P5FG00
DNA-directed RNA polymerase, subunit RPB.
   
 0.661
A0A2P5CPS4
Transcription initiation factor.
   
 0.635
A0A2P5EZN8
Transcription initiation factor.
   
 0.635
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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