STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FE31Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
A0A2P5EDJ0
TAFII55 protein, conserved region.
    
 0.984
A0A2P5EM06
Coatomer beta subunit.
    
 0.984
A0A2P5EZX6
Histone-fold protein.
    
 0.984
A0A2P5ETR4
Transcription initiation factor.
   
 0.980
A0A2P5FPK1
Guanine nucleotide-binding protein, beta subunit.
   
 0.980
A0A2P5DGK7
Transcription initiation factor.
   
 0.978
A0A2P5F9V0
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.977
A0A2P5C4Z8
Core histone macro-H2A.
   
 0.970
A0A2P5F8N8
Transcription initiation factor.
   
 0.970
A0A2P5DST5
TAFII28-like protein.
    
 0.969
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.