STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FEC0Nucleosome assembly protein (NAP); Belongs to the nucleosome assembly protein (NAP) family. (197 aa)    
Predicted Functional Partners:
A0A2P5BAT1
Coatomer beta subunit.
   
 
 0.845
A0A2P5FB41
Histone H2A; Belongs to the histone H2A family.
  
 
 0.844
A0A2P5AYL3
Histone H2A; Belongs to the histone H2A family.
  
 
 0.841
A0A2P5EYY3
Histone H2A; Belongs to the histone H2A family.
  
 
 0.841
A0A2P5F0T1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
 
 0.780
A0A2P5D9T1
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.751
A0A2P5F802
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.751
A0A2P5AKY6
Ribosomal protein.
   
   0.660
A0A2P5FN20
Ribosomal protein.
   
   0.660
A0A2P5FEQ3
Protein kinase-like domain containing protein.
    
   0.622
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.