STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FEC5Late embryogenesis abundant protein. (254 aa)    
Predicted Functional Partners:
A0A2P5D111
S-locus glycoprotein.
  
     0.479
A0A2P5EQW4
Cytochrome P.
  
     0.445
A0A2P5ER84
Cryptochrome C-terminal.
  
     0.441
A0A2P5E9U3
Peroxin.
  
     0.437
A0A2P5FGJ7
Plastid division protein PDV.
  
     0.426
A0A2P5FEC7
Lateral organ boundaries domain containing protein.
  
     0.417
A0A2P5CLW9
Mitochodrial transcription termination factor.
  
     0.415
A0A2P5EY04
Dehydrin; Belongs to the plant dehydrin family.
  
     0.400
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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