STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorPOT14Potassium transporter; Potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family. (825 aa)    
Predicted Functional Partners:
A0A2P5EBB0
DNA helicase, ATP-dependent.
    
 
 0.560
A0A2P5FI20
Pre-rRNA-processing protein IPI1/Testis-expressed sequence 10 protein.
    
 0.509
A0A2P5EFE9
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.500
A0A2P5ETT2
Phytocyanin domain containing protein.
   
 0.455
A0A2P5EKP5
P-loop containing nucleoside triphosphate hydrolase.
   
  0.448
A0A2P5EEG5
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.447
A0A2P5CEX4
Las1-like.
    
  0.439
A0A2P5E808
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.437
A0A2P5FUZ5
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.437
A0A2P5ED52
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.427
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.