STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FG33High-affinity nitrate transporter; Involved in nitrate transport. (205 aa)    
Predicted Functional Partners:
A0A2P5B295
Octamer-binding transcription factor.
  
     0.498
A0A2P5FIW3
Immunoglobulin-like fold containing protein.
  
     0.493
A0A2P5CWP1
Transmembrane protein 45A.
  
     0.487
A0A2P5DBK4
Uncharacterized protein.
  
     0.481
A0A2P5F2W7
Uncharacterized protein.
  
     0.472
A0A2P5A9L3
Maternal effect embryo arrest.
  
     0.458
A0A2P5E5Q0
Oxoglutarate/iron-dependent dioxygenase.
  
     0.457
A0A2P5FBS5
Ubiquitin domain containing protein.
  
     0.456
A0A2P5BR03
Ataxin-2, C-terminal.
  
     0.451
A0A2P5CWM1
Uncharacterized protein.
  
     0.447
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.