STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FH75Glycoside hydrolase; Belongs to the glycosyl hydrolase 17 family. (503 aa)    
Predicted Functional Partners:
A0A2P5ECS2
Electron transfer flavoprotein, beta subunit.
  
 0.977
A0A2P5FRM0
Electron transfer flavoprotein, alpha subunit.
  
 0.977
A0A2P5AKE4
Ketose-bisphosphate aldolase, class-II.
  
 0.940
A0A2P5D3A0
Phenol hydroxylase reductase.
   
 
 0.926
A0A2P5D3E5
Eukaryotic molybdopterin oxidoreductase.
   
 
 0.926
A0A2P5ES29
Lipoamide Acyltransferase.
   
 0.918
A0A2P5E964
Methylmalonyl-CoA decarboxylase, alpha subunit.
  
 
 0.917
TorKAT2
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.907
TorKAT1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.907
A0A2P5BGY2
Protein ELF4-LIKE.
  
 0.895
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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