STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FHF4Cyclophilin-type peptidyl-prolyl cis-trans isomerase. (172 aa)    
Predicted Functional Partners:
A0A2P5G0W1
Signal transduction response regulator.
   
 0.984
A0A2P5FAM4
WD repeat containing protein.
    
 0.982
A0A2P5FSR8
SKI-interacting protein, SKIP.
   
 0.970
A0A2P5CVD0
Isy1-like splicing.
   
  0.952
A0A2P5EU85
mRNA splicing factor SYF.
    
 0.950
A0A2P5EA98
Signal transduction response regulator.
   
 0.947
A0A2P5EAC3
Uncharacterized protein.
   
 0.947
A0A2P5FJX7
Uncharacterized protein.
    
  0.942
A0A2P5F075
Zinc finger protein.
    
 0.935
A0A2P5E7I9
Splicing factor-like protein.
   
 0.929
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.