STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FJN5O-acyltransferase WSD1, C-terminal. (84 aa)    
Predicted Functional Partners:
A0A2P5D6Z0
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.790
A0A2P5FG91
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.790
A0A2P5FHL2
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.790
A0A2P5FAM4
WD repeat containing protein.
    
   0.629
A0A2P5F1A4
Methyltransferase.
  
 
   0.486
A0A2P5CX99
Methyltransferase.
  
 
   0.477
A0A2P5ECK5
Trichome birefringence-like family.
  
     0.469
A0A2P5EIU0
Clathrin, heavy chain.
    
 0.465
A0A2P5EM49
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.465
A0A2P5FNI0
Clathrin, heavy chain.
    
 0.465
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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