STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FLZ8Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
A0A2P5D6Z0
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.893
A0A2P5FG91
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.893
A0A2P5FHL2
Phosphatidylinositol 3-kinase, Vps34 type; Belongs to the PI3/PI4-kinase family.
    
 0.893
A0A2P5FC78
Protein translocase SEC61 complex, gamma subunit.
   
 0.783
A0A2P5FDA6
Protein translocase SEC61 complex, gamma subunit.
   
 0.783
A0A2P5EH82
Phosphatidylinositol Kinase; Belongs to the PI3/PI4-kinase family.
   
 0.763
A0A2P5E8Z0
Phosphatidylinositol Kinase; Belongs to the PI3/PI4-kinase family.
   
 0.757
A0A2P5FNJ9
Signal recognition particle, SRP54 subunit.
    
 0.737
A0A2P5EIU5
Phosphoinositide phospholipase C.
    
 0.633
A0A2P5EJ21
Phosphoinositide phospholipase C.
    
 0.633
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.