Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5AXK1 | A0A2P5FMI5 | Peptidyl-tRNA hydrolase. | RNA-binding, CRM domain containing protein. | 0.558 |
A0A2P5CAR5 | A0A2P5E8D7 | Integrator complex subunit. | KH-domain/beta-lactamase-domain protein, archaea. | 0.999 |
A0A2P5CAR5 | A0A2P5FMI5 | Integrator complex subunit. | RNA-binding, CRM domain containing protein. | 0.565 |
A0A2P5D3A0 | A0A2P5D3E5 | Phenol hydroxylase reductase. | Eukaryotic molybdopterin oxidoreductase. | 0.999 |
A0A2P5D3A0 | A0A2P5FMI5 | Phenol hydroxylase reductase. | RNA-binding, CRM domain containing protein. | 0.698 |
A0A2P5D3E5 | A0A2P5D3A0 | Eukaryotic molybdopterin oxidoreductase. | Phenol hydroxylase reductase. | 0.999 |
A0A2P5D3E5 | A0A2P5FMI5 | Eukaryotic molybdopterin oxidoreductase. | RNA-binding, CRM domain containing protein. | 0.698 |
A0A2P5DTG0 | A0A2P5ECN2 | Plant organelle RNA recognition domain containing protein. | RNA-binding, CRM domain containing protein. | 0.724 |
A0A2P5DTG0 | A0A2P5ES65 | Plant organelle RNA recognition domain containing protein. | PPR containing protein. | 0.435 |
A0A2P5DTG0 | A0A2P5FMI5 | Plant organelle RNA recognition domain containing protein. | RNA-binding, CRM domain containing protein. | 0.627 |
A0A2P5DTG0 | A0A2P5FNP4 | Plant organelle RNA recognition domain containing protein. | APO domain containing protein. | 0.687 |
A0A2P5DTG0 | A0A2P5FSK0 | Plant organelle RNA recognition domain containing protein. | Ribonuclease III domain containing protein. | 0.714 |
A0A2P5E8D7 | A0A2P5CAR5 | KH-domain/beta-lactamase-domain protein, archaea. | Integrator complex subunit. | 0.999 |
A0A2P5E8D7 | A0A2P5FMI5 | KH-domain/beta-lactamase-domain protein, archaea. | RNA-binding, CRM domain containing protein. | 0.550 |
A0A2P5ECN2 | A0A2P5DTG0 | RNA-binding, CRM domain containing protein. | Plant organelle RNA recognition domain containing protein. | 0.724 |
A0A2P5ECN2 | A0A2P5ES65 | RNA-binding, CRM domain containing protein. | PPR containing protein. | 0.434 |
A0A2P5ECN2 | A0A2P5FMI5 | RNA-binding, CRM domain containing protein. | RNA-binding, CRM domain containing protein. | 0.571 |
A0A2P5ECN2 | A0A2P5FNP4 | RNA-binding, CRM domain containing protein. | APO domain containing protein. | 0.647 |
A0A2P5ECN2 | A0A2P5FSK0 | RNA-binding, CRM domain containing protein. | Ribonuclease III domain containing protein. | 0.594 |
A0A2P5ES65 | A0A2P5DTG0 | PPR containing protein. | Plant organelle RNA recognition domain containing protein. | 0.435 |
page 1 of 3