STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FMI5RNA-binding, CRM domain containing protein. (574 aa)    
Predicted Functional Partners:
A0A2P5D3A0
Phenol hydroxylase reductase.
    
 0.698
A0A2P5D3E5
Eukaryotic molybdopterin oxidoreductase.
    
 0.698
A0A2P5DTG0
Plant organelle RNA recognition domain containing protein.
  
 
 
 0.627
A0A2P5ES65
PPR containing protein.
  
   
 0.575
A0A2P5FNP4
APO domain containing protein.
  
   
 0.572
A0A2P5ECN2
RNA-binding, CRM domain containing protein.
 
 
0.571
A0A2P5CAR5
Integrator complex subunit.
    
 0.565
A0A2P5FSK0
Ribonuclease III domain containing protein.
    
 
 0.565
A0A2P5AXK1
Peptidyl-tRNA hydrolase.
   
 
 0.558
A0A2P5E8D7
KH-domain/beta-lactamase-domain protein, archaea.
    
 0.550
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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