STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FMX4Seven transmembrane domain protein. (179 aa)    
Predicted Functional Partners:
A0A2P5CPI5
Nicastrin.
    
 
 0.949
A0A2P5C5L7
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.948
A0A2P5EEF5
Uncharacterized protein.
    
 
 0.945
A0A2P5ENZ7
Ribosomal protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.899
A0A2P5DAL2
Protein Asterix.
   
   0.878
A0A2P5FXG7
Ribosomal protein.
   
   0.877
A0A2P5FZA6
Ribosomal protein.
    
 
 0.877
A0A2P5ECN9
Ribosomal protein.
    
   0.874
A0A2P5DMF2
Ribosomal protein.
    
   0.867
A0A2P5DWH6
Ribosomal protein.
    
   0.867
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.