STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FN50Peptidase S26A, signal peptidase I. (361 aa)    
Predicted Functional Partners:
A0A2P5BM86
Peptidase S26A, signal peptidase I.
  
  
 
0.943
A0A2P5F168
Peptidase S26A, signal peptidase I.
  
  
 
0.942
A0A2P5FUH0
Ubiquitin-associated domain containing protein.
    
 0.918
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.896
A0A2P5EBB5
Microsomal signal peptidase 12kDa subunit.
   
 0.887
TorDNF1
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
   
 0.820
A0A2P5CVF7
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
   
 0.820
A0A2P5EZN9
DNA ligase, ATP-dependent.
    
 0.735
A0A2P5A7H3
Metallo-beta-lactamase.
  
 
 0.658
A0A2P5BN99
DNA ligase.
  
 
 0.658
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.