STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FNG7S-phase kinase-associated protein 1-like; Belongs to the SKP1 family. (226 aa)    
Predicted Functional Partners:
A0A2P5BIC2
43kDa postsynaptic protein.
   
 0.933
A0A2P5EHP9
F-box domain containing protein.
    
 0.916
A0A2P5C909
Alpha-crystallin, subunit A.
   
 0.877
A0A2P5DD25
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.861
A0A2P5G196
JAB1/MPN/MOV34 metalloenzyme domain containing protein.
   
 0.840
A0A2P5DJI8
N-terminal acetyltransferase A, auxiliary subunit.
    
 0.803
A0A2P5E6N3
Ubiquitin.
    
  0.803
A0A2P5EBD9
Ubiquitin domain containing protein.
    
  0.803
A0A2P5EF89
Uncharacterized protein.
    
 0.766
A0A2P5EF94
F-box domain containing protein.
    
 0.766
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.