STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FNJ9Signal recognition particle, SRP54 subunit. (619 aa)    
Predicted Functional Partners:
A0A2P5AVC7
Signal recognition particle protein Ffh.
 
0.990
A0A2P5CNR2
Signal-recognition particle receptor FtsY.
 
0.990
A0A2P5EX07
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
0.990
A0A2P5FMG0
Small GTP-binding domain containing protein.
   
 0.990
A0A2P5DED8
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.980
A0A2P5E8G3
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.977
A0A2P5ECN9
Ribosomal protein.
   
 
 0.970
A0A2P5BGU0
Signal recognition particle, SRP19 subunit.
   
 
 0.967
A0A2P5FDG4
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
   
 0.967
A0A2P5FL10
SecY/SEC61-alpha family; Belongs to the SecY/SEC61-alpha family.
   
 0.967
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.