STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FP10LRR domain containing protein. (339 aa)    
Predicted Functional Partners:
A0A2P5FEL5
LRR domain containing protein.
  
     0.500
A0A2P5AV29
LRR domain containing protein.
  
     0.499
A0A2P5EK42
LRR domain containing protein.
  
 
  0.476
A0A2P5EPV1
LRR domain containing protein.
  
     0.473
A0A2P5B212
LRR domain containing protein.
  
     0.462
A0A2P5EAQ1
LRR domain containing protein.
  
 
  0.456
A0A2P5FS60
LRR domain containing protein.
  
     0.455
A0A2P5F8K4
LRR domain containing protein.
  
     0.453
A0A2P5EY37
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.446
A0A2P5CC75
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.439
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.