STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FQ42Epimerase family protein SDR39U. (134 aa)    
Predicted Functional Partners:
A0A2P5APB4
Acid phosphatase/vanadium-dependent haloperoxidase-related.
   
    0.612
A0A2P5EG70
Acid phosphatase/vanadium-dependent haloperoxidase-related.
   
    0.612
A0A2P5F297
Acid phosphatase/vanadium-dependent haloperoxidase-related.
   
    0.612
A0A2P5EE24
Zinc/iron permease.
  
    0.528
A0A2P5EUJ4
Zinc/iron permease.
  
    0.528
A0A2P5FBF9
Zinc/iron permease.
  
    0.528
A0A2P5FY15
B3 DNA binding domain containing protein.
  
     0.491
A0A2P5FWL1
Uncharacterized protein.
 
     0.485
A0A2P5F975
Uncharacterized protein.
  
     0.483
TorSCL12
GRAS transcription factor; Belongs to the GRAS family.
  
     0.479
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.