STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FR60Reticulon-like protein. (572 aa)    
Predicted Functional Partners:
A0A2P5CC95
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.978
A0A2P5F531
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.978
A0A2P5BKN3
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.975
A0A2P5F1U4
Cytochrome P450, E-class, group IV; Belongs to the cytochrome P450 family.
 
 
 0.973
TorSTE1
Fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 0.925
A0A2P5EML9
Erg.
   
 
 0.899
A0A2P5G0M1
Reticulon-like protein.
  
  
 
0.892
A0A2P5G0M9
Splicing factor-like protein.
    
  0.877
A0A2P5ECW0
FAD/NAD(P)-binding domain containing protein.
   
 
 0.780
A0A2P5ECY1
FAD/NAD(P)-binding domain containing protein.
   
 
 0.780
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.