STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FR71Pentatricopeptide repeat. (132 aa)    
Predicted Functional Partners:
A0A2P5EDF3
Tyrosine-protein kinase.
  
   0.548
A0A2P5FP43
Heme peroxidase; Belongs to the peroxidase family.
  
     0.539
A0A2P5F7K9
Small auxin-up RNA.
  
     0.533
A0A2P5A724
Uncharacterized protein.
  
     0.532
A0A2P5AM18
Protein GLUTAMINE DUMPER.
  
     0.532
A0A2P5F1Y9
Protein Networked (NET), actin-binding (NAB) domain containing protein.
  
     0.532
A0A2P5ET89
SGNH hydrolase-type esterase domain containing protein.
  
     0.530
A0A2P5C4Y3
EF-hand domain pair.
  
     0.528
A0A2P5FSL9
Gibberellin regulated protein.
  
     0.528
A0A2P5CLY0
GDP-fucose protein O-fucosyltransferase.
  
     0.525
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.