STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FSM9Lysine methyltransferase. (228 aa)    
Predicted Functional Partners:
A0A2P5FXZ4
Putative retinoblastoma binding protein (RIZ).
   
 0.687
A0A2P5EU82
Glucosamine-fructose-6-phosphate aminotransferase, isomerising.
     
 0.681
A0A2P5EC34
Glucosamine 6-phosphate N-acetyltransferase.
     
 0.666
A0A2P5ECS2
Electron transfer flavoprotein, beta subunit.
     
 0.643
A0A2P5EIR4
Fructose-2,6-bisphosphatase.
    
 0.587
A0A2P5FCE5
Phosphoglycerate mutase family protein.
    
 0.587
A0A2P5BM54
Notch.
   
  0.508
A0A2P5C4J5
F-box domain containing protein.
   
  0.508
A0A2P5C4N2
Aspartate decarboxylase-like domain containing protein.
   
  0.508
A0A2P5CUK3
Spastin; Belongs to the AAA ATPase family.
   
  0.508
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.