STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FTD9LRR domain containing protein. (294 aa)    
Predicted Functional Partners:
A0A2P5FEL5
LRR domain containing protein.
  
 
   0.523
A0A2P5EQW0
LRR domain containing protein.
  
 
  0.510
A0A2P5EQV4
LRR domain containing protein.
  
 
  0.464
TorSERK3
Somatic embryogenesis receptor-like kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.459
A0A2P5EY37
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.446
A0A2P5FS60
LRR domain containing protein.
  
 
   0.443
A0A2P5CC75
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.439
A0A2P5FS33
LRR domain containing protein.
  
 
   0.436
A0A2P5AG79
LRR domain containing protein.
  
 
   0.435
A0A2P5ENR1
Small ribonucleoprotein associated, SmB/SmN.
    
 0.435
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.