STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FVL2Modifier of rudimentary, Modr. (230 aa)    
Predicted Functional Partners:
A0A2P5G0W9
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.998
A0A2P5D9A9
Ubiquitin-fold modifier-conjugating enzyme.
   
 0.984
A0A2P5FB43
Ubiquitin-fold modifier-conjugating enzyme.
   
 0.984
A0A2P5FRF5
Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.950
A0A2P5FS16
Snf7 family.
     
 0.910
A0A2P5DEP2
Snf7 family.
     
 0.892
A0A2P5BGZ3
Snf7 family.
    
 0.819
A0A2P5DRB0
Anaphase-promoting complex subunit.
     
 0.819
A0A2P5BJ72
Snf7 family.
     
 0.818
A0A2P5FTM2
Snf7 family.
     
 0.818
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.