STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FVN4Sequence-specific DNA binding transcription factor. (444 aa)    
Predicted Functional Partners:
A0A2P5FDR3
Lateral organ boundaries domain containing protein.
   
  
 0.580
A0A2P5DS57
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.565
A0A2P5FDH9
Nucleic acid-binding, OB-fold containing protein.
  
     0.524
A0A2P5ELE3
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.496
A0A2P5FIK2
Uncharacterized protein.
  
     0.493
A0A2P5FGN0
Putative membrane-associated kinase regulator.
  
     0.486
A0A2P5CAU6
Multiple organellar RNA editing factor 1, mitochondrial.
  
     0.473
A0A2P5EMR2
Phytosulfokine.
  
     0.471
TorERF43
AP2/ERF transcription factor.
   
 
 0.463
A0A2P5G134
Zinc finger, SWIM-type.
  
     0.461
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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