STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FWG0FkbH domain containing protein. (173 aa)    
Predicted Functional Partners:
A0A2P5DJI8
N-terminal acetyltransferase A, auxiliary subunit.
   
  0.492
A0A2P5FLS4
TNF receptor-associated factor.
   
  0.454
A0A2P5FLS9
Serine/threonine protein kinase.
   
  0.454
A0A2P5FLU9
Uncharacterized protein.
   
  0.454
A0A2P5CIC0
Cdk-activating kinase assembly factor.
    
 0.424
A0A2P5F0S8
Ubiquitin.
    
 0.410
A0A2P5EL00
BRISC and BRCA1-A complex member.
    
  0.409
A0A2P5C4D6
N-terminal acetyltransferase A, auxiliary subunit.
    
 0.404
A0A2P5FXZ4
Putative retinoblastoma binding protein (RIZ).
    
  0.401
A0A2P5FKP2
IIIC transcription factor.
    
  0.400
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.