STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5FYP1Parvalbumin. (226 aa)    
Predicted Functional Partners:
A0A2P5EB37
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.789
A0A2P5ETT2
Phytocyanin domain containing protein.
   
 0.693
A0A2P5EG05
Parvalbumin.
    
 0.686
A0A2P5EU58
DNA repair protein Rad.
    
 0.602
A0A2P5ESD6
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.598
A0A2P5FKK1
Peptidylprolyl isomerase.
   
 0.594
A0A2P5FWN0
Protein TIME FOR COFFEE.
   
 0.571
A0A2P5FUI1
4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
     
 0.559
A0A2P5FUI5
4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
     
 0.559
A0A2P5BV03
Calcium/calmodulin-dependent/calcium-dependent protein kinase; Belongs to the protein kinase superfamily.
    
 0.519
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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