STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5G186FAS1 domain containing protein. (325 aa)    
Predicted Functional Partners:
A0A2P5EFD8
DUF1421 domain-containing protein.
   
 0.671
A0A2P5EH85
Guanine nucleotide-binding protein, beta subunit.
    
  0.660
A0A2P5AME2
Ureohydrolase; Belongs to the arginase family.
   
 
 0.659
A0A2P5EEB3
Chlorophyllase.
    
 0.651
A0A2P5ELR5
Transcription regulator AsnC-type.
    
 0.651
A0A2P5FR09
Protein-tyrosine phosphatase.
    
 0.645
A0A2P5BL55
Zinc finger, FYVE/PHD-type.
    
  0.629
A0A2P5AS83
N-terminal acetyltransferase A, auxiliary subunit.
    
 0.619
A0A2P5E9L4
N-terminal acetyltransferase A, auxiliary subunit.
    
 0.619
A0A2P5FFF8
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
    
 0.618
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.