Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2P5CW72 | A0A2P5ES92 | A0A2P5CW72 | A0A2P5ES92 | Photosystem I PsaO. | Photosystem I PsaH, reaction centre subunit VI. | 0.982 |
A0A2P5CW72 | A0A2P5EVW7 | A0A2P5CW72 | A0A2P5EVW7 | Photosystem I PsaO. | PsbP family. | 0.837 |
A0A2P5CW72 | A0A2P5FBG8 | A0A2P5CW72 | A0A2P5FBG8 | Photosystem I PsaO. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.745 |
A0A2P5CW72 | A0A2P5FXW4 | A0A2P5CW72 | A0A2P5FXW4 | Photosystem I PsaO. | Photosystem II PsbO, manganese-stabilising. | 0.561 |
A0A2P5CW72 | A0A2P5G1Y7 | A0A2P5CW72 | A0A2P5G1Y7 | Photosystem I PsaO. | High affinity sulfate transporter. | 0.600 |
A0A2P5ES92 | A0A2P5CW72 | A0A2P5ES92 | A0A2P5CW72 | Photosystem I PsaH, reaction centre subunit VI. | Photosystem I PsaO. | 0.982 |
A0A2P5ES92 | A0A2P5EVW7 | A0A2P5ES92 | A0A2P5EVW7 | Photosystem I PsaH, reaction centre subunit VI. | PsbP family. | 0.791 |
A0A2P5ES92 | A0A2P5FBG8 | A0A2P5ES92 | A0A2P5FBG8 | Photosystem I PsaH, reaction centre subunit VI. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.867 |
A0A2P5ES92 | A0A2P5FXW4 | A0A2P5ES92 | A0A2P5FXW4 | Photosystem I PsaH, reaction centre subunit VI. | Photosystem II PsbO, manganese-stabilising. | 0.610 |
A0A2P5ES92 | A0A2P5G1Y7 | A0A2P5ES92 | A0A2P5G1Y7 | Photosystem I PsaH, reaction centre subunit VI. | High affinity sulfate transporter. | 0.643 |
A0A2P5EVW7 | A0A2P5CW72 | A0A2P5EVW7 | A0A2P5CW72 | PsbP family. | Photosystem I PsaO. | 0.837 |
A0A2P5EVW7 | A0A2P5ES92 | A0A2P5EVW7 | A0A2P5ES92 | PsbP family. | Photosystem I PsaH, reaction centre subunit VI. | 0.791 |
A0A2P5EVW7 | A0A2P5FBG8 | A0A2P5EVW7 | A0A2P5FBG8 | PsbP family. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.995 |
A0A2P5EVW7 | A0A2P5FVZ1 | A0A2P5EVW7 | A0A2P5FVZ1 | PsbP family. | Complex 1 LYR protein; Belongs to the complex I LYR family. | 0.963 |
A0A2P5EVW7 | A0A2P5FXW4 | A0A2P5EVW7 | A0A2P5FXW4 | PsbP family. | Photosystem II PsbO, manganese-stabilising. | 0.986 |
A0A2P5EVW7 | A0A2P5G1Y7 | A0A2P5EVW7 | A0A2P5G1Y7 | PsbP family. | High affinity sulfate transporter. | 0.620 |
A0A2P5FBG8 | A0A2P5CW72 | A0A2P5FBG8 | A0A2P5CW72 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I PsaO. | 0.745 |
A0A2P5FBG8 | A0A2P5ES92 | A0A2P5FBG8 | A0A2P5ES92 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I PsaH, reaction centre subunit VI. | 0.867 |
A0A2P5FBG8 | A0A2P5EVW7 | A0A2P5FBG8 | A0A2P5EVW7 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | PsbP family. | 0.995 |
A0A2P5FBG8 | A0A2P5FVZ1 | A0A2P5FBG8 | A0A2P5FVZ1 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Complex 1 LYR protein; Belongs to the complex I LYR family. | 0.967 |
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