STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5G2C4Lipoyl synthase. (196 aa)    
Predicted Functional Partners:
A0A2P5DRT1
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
 
 0.954
A0A2P5EU68
Thioredoxin.
   
   0.832
A0A2P5FLD1
Malate dehydrogenase, NADP-dependent.
   
 0.587
A0A2P5FPP5
Thioredoxin.
   
 
 0.532
A0A2P5E8J2
Thioredoxin.
   
   0.530
A0A2P5CWU2
Phenol hydroxylase reductase.
  
  
 0.493
A0A2P5DSS9
Glutaredoxin-like protein; Belongs to the glutaredoxin family.
  
     0.484
A0A2P5F6Q9
Ribosomal protein PSRP-3/Ycf.
  
    0.442
A0A2P5FWN0
Protein TIME FOR COFFEE.
    
 0.442
A0A2P5EGF7
Photosystem II Pbs.
  
  
 0.436
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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