STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppFDipeptide transport ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
dppC
Dipeptide transport system permease protein DppC.
 
 0.997
dppB
Dipeptide transport system permease protein DppB.
 
 0.995
dppD
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
 
0.990
AFJ45274.1
Transporter.
 
 
 0.961
gsiD
Glutathione ABC transporter; Permease protein GsiD.
  
 0.939
oppC
Oligopeptide ABC transporter; Permease protein OppC.
  
 0.892
nikC
Nickel transport system permease protein NikC.
  
 0.879
gsiC
Glutathione ABC transporter; Permease protein GsiC.
  
 0.854
nikB
Nickel transport system permease protein NikB.
  
 0.852
oppB
Oligopeptide ABC transporter; Permease protein OppB.
  
 0.843
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.