STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsED-allulose-6-phosphate 3-epimerase. (230 aa)    
Predicted Functional Partners:
rpiB
Ribose-5-phosphate isomerase B.
 
 
 0.971
fbp
Fructose-1,6-bisphosphatase.
  
 
 0.923
manA
Mannose-6-phosphate isomerase; (Valine--tRNA ligase) (ValRS); Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.921
glpX
Fructose-1,6-bisphosphatase class II.
    
 0.921
pfkA
6-phosphofructokinase I; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     
 0.916
mak
Fructokinase.
  
 
 0.906
AFJ46353.1
Putative transketolase; N-terminal subunit.
   
 0.851
alsK
D-allose kinase; Catalyzes the phosphorylation of D-allose to D-allose 6- phosphate.
 
  
 0.841
alsC
D-allose transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
  
    0.709
alsA
D-allose transport; ATP-binding protein.
  
    0.704
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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