STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuBD-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family. (489 aa)    
Predicted Functional Partners:
uxuA
Mannonate hydrolase; Catalyzes the dehydration of D-mannonate.
 
 
 0.989
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.974
uxaC
Uronate isomerase.
 
 
 0.967
rspB
Starvation-sensing protein RspB.
    
 0.907
ydfI
Mannitol dehydrogenase family protein.
  
  
 
0.903
licR
Operon regulator protein LicR; Trimethoprim resistance.
  
  
 0.751
fruB
PTS system fructose-specific phosphotransferase enzyme IIA component FruB.
  
  
 0.644
uxuR
Uxu operon transcriptional regulator UxuR; NAD binding domain.
 
     0.570
uxaA
Altronate hydrolase; Hcp family.
  
 0.495
kdgK
2-dehydro-3-deoxygluconokinase; MFS family.
 
   
 0.468
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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