Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaIPhenylacetic acid degradation protein. (141 aa)    
Predicted Functional Partners:
paaB
Phenylacetic acid degradation protein.
 
 
 0.997
paaC
Phenylacetic acid degradation protein.
 
 
 0.997
paaD
Phenylacetic acid degradation protein.
 
 
 0.997
paaE
Phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.997
paaA
Phenylacetic acid degradation protein.
 
 
 0.996
paaK
phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.996
paaG
acyl-CoA hydratase; Zinc-binding dehydrogenase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.964
paaH
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.942
paaN
Phenylacetic acid degradation protein PaaN.
 
  
 0.918
feaB
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.900
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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