Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AFJ47019.1Two component transcriptional regulator; LuxR family. (212 aa)    
Predicted Functional Partners:
arcB
Aerobic respiration control sensor protein ArcB; AraC family.
   
 
 0.692
AFJ45967.1
Putative sensor protein; Similar to bacterial microcompartments family protein.
 
 
 0.679
AFJ47020.1
Hypothetical protein.
 
   
 0.658
AFJ46248.1
Putative sensor protein.
 
 
 0.644
barA
Sensor histidine kinase/response regulator BarA.
   
 
 0.571
AFJ47018.1
NADP-alcohol dehydrogenase.
  
    0.515
AFJ47021.1
Hypothetical protein.
       0.433
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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