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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47052.1Transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
AFJ46466.1
Putative transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.695
xapR
Xanthosine operon regulatory protein XapR; Belongs to the LysR transcriptional regulatory family.
  
     0.656
AFJ48663.1
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.647
AFJ46688.1
Putative transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.632
AFJ48182.1
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.632
oxyR
Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.621
AFJ47992.1
Putative transcriptional regulator LysR family; Small subunit; Belongs to the LysR transcriptional regulatory family.
  
     0.620
AFJ48707.1
Putative transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.600
AFJ46158.1
Putative transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.597
AFJ45191.1
Putative transcriptional regulatory protein; LysR family.
  
     0.587
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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