Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AFJ47071.1GMC oxidoreductase family protein. (550 aa)    
Predicted Functional Partners:
AFJ47070.1
Hypothetical protein.
 
 
   0.970
AFJ47072.1
Putative dehydrogenase; Cytochrome C subunit.
 
 
 0.951
AFJ48114.1
Gluconate 2-dehydrogenase gamma chain.
 
 
 0.831
AFJ46604.1
Putative dehydrogenase; Cytochrome C subunit precursor.
 
 
 0.763
AFJ48112.1
Gluconate 2-dehydrogenase cytochrome c subunit.
 
 
 0.728
sseB
Enhanced serine sensitivity.
    
 0.561
AFJ48676.1
Putative TonB dependent receptor.
  
     0.557
yfcJ
Putative transport protein; Similar to MrkF protein.
  
     0.432
AFJ46946.1
Di-heme cytochrome c peroxidase family protein.
  
   
 0.408
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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