STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47152.1Phage terminase; Large subunit. (554 aa)    
Predicted Functional Partners:
AFJ47153.1
Terminase; Small subunit.
    0.981
AFJ47151.1
Phage portal protein.
 
   
 0.960
AFJ47149.1
Phage major capsid protein; HK97 family.
 
     0.947
AFJ47154.1
Putative phage-related protein; Similar to HNH endonuclease.
 
  
 0.947
AFJ47150.1
Phage prohead protease; HK97 family.
 
     0.868
AFJ47147.1
Hypothetical protein; Short chain dehydrogenase/reductase family.
       0.658
AFJ47144.1
Hypothetical protein.
       0.623
AFJ47146.1
Hypothetical protein.
       0.623
AFJ47148.1
Hypothetical protein.
       0.623
AFJ47140.1
Phage tail tape measure protein; TP901 family.
 
     0.585
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.