STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47284.1NinG prophage family protein. (195 aa)    
Predicted Functional Partners:
AFJ47285.1
NinB-like phage protein.
 
     0.821
AFJ47283.1
Hypothetical protein.
       0.768
AFJ47290.1
Putative replication protein O of bacteriophage.
 
     0.646
AFJ47137.1
Tail assembly protein K.
 
     0.620
AFJ47138.1
Phage minor tail protein L.
  
     0.608
AFJ45295.1
Putative transcriptional regulator; TetR family.
  
     0.588
malM
Maltose operon periplasmic protein precursor.
  
     0.573
ybhC
Putative lipoprotein YbhC precursor.
  
     0.570
AFJ47130.1
Host specificity protein J.
  
     0.564
AFJ46255.1
Putative membrane protein; Catalytic region.
  
    0.563
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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