STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47505.1Iron ABC transporter; ATP-binding protein. (246 aa)    
Predicted Functional Partners:
AFJ47507.1
Putative ABC transporter; Extracellular binding protein.
 
 
 0.964
AFJ47506.1
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.953
AFJ48675.1
ABC tansporter; Periplasmic-binding protein.
 
 
 0.805
AFJ47504.1
Cupin 2 domain-containing protein.
 
     0.759
AFJ48674.1
ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.754
AFJ48117.1
Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.727
AFJ47503.1
Putative methyltransferase.
       0.719
AFJ46827.1
FecCD-family membrane transport protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.718
AFJ45856.1
Putative ABC transporter; Permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.696
fepD
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.679
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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