Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFJ47905.1 | pxpA | EBL_c28350 | EBL_c28370 | Putative allophanate hydrolase. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.997 |
AFJ47905.1 | ybgI | EBL_c28350 | EBL_c26770 | Putative allophanate hydrolase. | Protein YbgI. | 0.530 |
AFJ47905.1 | ybgJ | EBL_c28350 | EBL_c26760 | Putative allophanate hydrolase. | Putative carboxylase. | 0.883 |
AFJ47905.1 | ybgK | EBL_c28350 | EBL_c26750 | Putative allophanate hydrolase. | Putative carboxylase. | 0.889 |
chaC | pxpA | EBL_c18800 | EBL_c28370 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.900 |
chaC | ybgJ | EBL_c18800 | EBL_c26760 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Putative carboxylase. | 0.900 |
chaC | ybgK | EBL_c18800 | EBL_c26750 | Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. | Putative carboxylase. | 0.900 |
glsA | gltB | EBL_c16980 | EBL_c03650 | Putative glutaminase; Belongs to the glutaminase family. | Glutamate synthase; Large subunit. | 0.943 |
glsA | gshA | EBL_c16980 | EBL_c09030 | Putative glutaminase; Belongs to the glutaminase family. | Gamma-glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.800 |
glsA | putA | EBL_c16980 | EBL_c24520 | Putative glutaminase; Belongs to the glutaminase family. | Bifunctional protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.916 |
glsA | pxpA | EBL_c16980 | EBL_c28370 | Putative glutaminase; Belongs to the glutaminase family. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.800 |
glsA | ybgJ | EBL_c16980 | EBL_c26760 | Putative glutaminase; Belongs to the glutaminase family. | Putative carboxylase. | 0.809 |
glsA | ybgK | EBL_c16980 | EBL_c26750 | Putative glutaminase; Belongs to the glutaminase family. | Putative carboxylase. | 0.800 |
gltB | glsA | EBL_c03650 | EBL_c16980 | Glutamate synthase; Large subunit. | Putative glutaminase; Belongs to the glutaminase family. | 0.943 |
gltB | gshA | EBL_c03650 | EBL_c09030 | Glutamate synthase; Large subunit. | Gamma-glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.800 |
gltB | putA | EBL_c03650 | EBL_c24520 | Glutamate synthase; Large subunit. | Bifunctional protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.942 |
gltB | pxpA | EBL_c03650 | EBL_c28370 | Glutamate synthase; Large subunit. | LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.800 |
gltB | ybgJ | EBL_c03650 | EBL_c26760 | Glutamate synthase; Large subunit. | Putative carboxylase. | 0.811 |
gltB | ybgK | EBL_c03650 | EBL_c26750 | Glutamate synthase; Large subunit. | Putative carboxylase. | 0.821 |
gshA | glsA | EBL_c09030 | EBL_c16980 | Gamma-glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | Putative glutaminase; Belongs to the glutaminase family. | 0.800 |
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