Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFJ47848.1Auxiliary transport protein; Membrane fusion protein (MFP) family. (355 aa)    
Predicted Functional Partners:
AFJ47849.1
ABC transporter; ATP binding protein.
 
  
 0.978
AFJ47850.1
Transporter.
 
  
 0.970
ybhF
Putative ABC-type transport protein YbhF.
 
  
 0.759
ybhS
Inner membrane transport permease.
 
  
 0.742
ybhR
Inner membrane transport permease.
 
  
 0.712
AFJ48698.1
Putative ABC-2 type transporter.
 
  
 0.701
eefC
Multidrug efflux outer membrane protein EefC.
 
 
 0.516
hlyIB
Toxin RTX-I translocation ATP-binding protein.
  
 
 0.492
tolC
Outer membrane protein TolC precursor.
  
 
 0.429
AFJ48119.1
Outer membrane channel protein.
  
 
 0.421
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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