STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47850.1Transporter. (374 aa)    
Predicted Functional Partners:
AFJ47848.1
Auxiliary transport protein; Membrane fusion protein (MFP) family.
 
  
 0.964
AFJ47849.1
ABC transporter; ATP binding protein.
 
 
0.947
ybhF
Putative ABC-type transport protein YbhF.
  
 0.831
AFJ48698.1
Putative ABC-2 type transporter.
 
     0.686
ybhG
Putative membrane protein YbhG.
 
  
 0.660
AFJ48699.1
HlyD secretion family protein.
 
  
 0.619
AFJ47847.1
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
    0.584
ybhS
Inner membrane transport permease.
 
  
 
0.561
ybhR
Inner membrane transport permease.
 
  
 
0.542
gltK
Glutamate/aspartate transport system permease protein.
     
 0.410
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.