STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47863.1Transcriptional regulator; AraC family. (335 aa)    
Predicted Functional Partners:
AFJ47859.1
Thioesterase superfamily protein.
 
     0.726
AFJ47860.1
Putative indolepyruvate oxidoreductase subunit B.
 
     0.695
AFJ47864.1
Cyclase family protein.
  
     0.663
AFJ47861.1
Putative indolepyruvate ferredoxin alpha subunit A.
 
     0.647
AFJ47853.1
Transcriptional regulator; MarR family.
 
    0.642
AFJ47858.1
Putative salicylyl-CoA 5-hydroxylase.
 
     0.600
maiA
Asp/Glu/hydantoin racemase family protein; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
     0.589
AFJ47857.1
Cupin 2 domain-containing protein; Proton pump, beta subunit.
 
     0.585
AFJ47865.1
Transcriptional regulator; MarR family.
  
    0.502
AFJ47855.1
Putative carbon-nitrogen hydrolase.
 
     0.467
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.