STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ47928.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
priC
Primosomal replication protein N''.
     
 0.765
yecA
Putative metal-binding protein; Related to the C-terminal domain of SecA; Belongs to the UPF0149 family.
  
     0.660
ybaN
Conserved inner membrane protein.
       0.549
osmE
Osmotically inducible lipoprotein E precursor; BolA family.
  
     0.520
tsgA
Major facilitator family transporter TsgA.
  
     0.497
yfeZ
Putative inner membrane protein; HK97 family.
  
     0.492
AFJ47081.1
Putative receptor.
  
     0.482
dnaC
DNA replication protein DnaC.
  
     0.481
tsx
Nucleoside-specific channel-forming protein tsx precursor.
  
     0.471
yigI
Thioesterase family protein.
  
     0.416
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.