STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ48866.1Putative membrane protein. (336 aa)    
Predicted Functional Partners:
AFJ48862.1
Hypothetical protein.
 
  
 0.960
AFJ48865.1
Putative TPR domain protein.
 
  
 0.956
AFJ48864.1
Von Willebrand factor type A domain protein.
 
   
 0.945
AFJ48867.1
Putative HAD-superfamily hydrolase protein.
 
     0.940
AFJ48859.1
Putative sulfatase.
 
     0.839
AFJ48863.1
Putative membrane protein.
     
 0.811
AFJ48861.1
Putative MoxR-like ATPase.
 
  
 0.801
AFJ45154.1
Hypothetical protein; Similar to putative capsular polysaccharide bisynthesis protein.
  
     0.750
AFJ45156.1
Conserved hypothetical membrane protein.
  
     0.730
aslB
Putative arylsulfatase regulatory protein.
 
     0.725
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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