STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001189235_05946Unannotated protein. (146 aa)    
Predicted Functional Partners:
GCA_001189235_05945
Unannotated protein.
     0.994
GCA_001189235_03085
Unannotated protein.
   
 0.827
GCA_001189235_06049
Unannotated protein.
    
 0.606
GCA_001189235_02639
Unannotated protein.
  
 
 0.566
GCA_001189235_03083
Unannotated protein.
    
 0.562
GCA_001189235_02642
Unannotated protein.
   
 
 0.552
GCA_001189235_06795
Unannotated protein.
  
  
 0.551
GCA_001189235_05944
Unannotated protein.
  
    0.517
GCA_001189235_02077
Unannotated protein.
   
 
 0.504
GCA_001189235_06076
Unannotated protein.
  
 
 0.491
Your Current Organism:
Bradyrhizobium embrapense
NCBI taxonomy Id: 630921
Other names: B. embrapense, BR 2212, Bradyrhizobium embrapense Delamuta et al. 2015, Bradyrhizobium sp. SEMIA 6208, CIAT 2372, LMG 2987, LMG:2987, SEMIA 6208, U674, strain CNPSo 2833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.