STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001189235_06490Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001189235_00249
Unannotated protein.
 
  
 0.951
GCA_001189235_06491
Unannotated protein.
       0.800
GCA_001189235_03085
Unannotated protein.
    
 0.678
GCA_001189235_00244
Unannotated protein.
 
 
 0.657
GCA_001189235_00533
Unannotated protein.
    
 0.656
GCA_001189235_03093
Unannotated protein.
    
 0.629
GCA_001189235_06487
Unannotated protein.
    
  0.605
GCA_001189235_01873
Unannotated protein.
 
   
 0.564
GCA_001189235_03092
Unannotated protein.
    
 0.522
GCA_001189235_06489
Unannotated protein.
       0.506
Your Current Organism:
Bradyrhizobium embrapense
NCBI taxonomy Id: 630921
Other names: B. embrapense, BR 2212, Bradyrhizobium embrapense Delamuta et al. 2015, Bradyrhizobium sp. SEMIA 6208, CIAT 2372, LMG 2987, LMG:2987, SEMIA 6208, U674, strain CNPSo 2833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.