STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrAPTS-II-BC-sucr: PTS system, sucrose-specific IIBC component. (456 aa)    
Predicted Functional Partners:
scrB
Sucrose-6-phosphate hydrolase family protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.995
sacA
Sucrose-6-phosphate hydrolase family protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.978
crr
Glucose-specific phosphotransferase enzyme IIA component.
 
 0.956
bfrA
Glycosyl hydrolases 43 family protein.
 
 
 0.933
ptsH
Phosphocarrier protein HPr.
  
 
  0.901
arbG
CAT RNA binding domain protein.
 
 
 0.765
scrY
Sucrose porin.
 
     0.639
scrR
Fruct_sucro_rep: D-fructose-responsive transcription factor family protein.
       0.626
dhaR
PAS fold family protein.
  
    0.626
fruA
FRU: PTS system, Fru family, IIB component domain protein.
  
  
 0.564
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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