STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhaLdha_L_ycgS: dihydroxyacetone kinase, L subunit. (210 aa)    
Predicted Functional Partners:
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM; Belongs to the PEP-utilizing enzyme family.
 
 0.999
dhaK
dhaK1: dihydroxyacetone kinase, DhaK subunit.
 0.999
dhaD
Glycerol dehydrogenase.
  
 
 0.941
dhaR
PAS fold family protein.
 
 
 
 0.905
glpA
glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.840
glpD
FAD dependent oxidoreductase family protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.818
gpsA
Ketopantoate reductase PanE/ApbA family protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.806
glpB
Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.
  
 
 0.806
glpC
glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit.
     
  0.800
fryA
PEP-utilizing enzyme, mobile domain protein.
  
  
 0.451
Your Current Organism:
Yersinia intermedia
NCBI taxonomy Id: 631
Other names: ATCC 29909, CCUG 11292, CIP 80.28, DSM 18517, JCM 7579, NCTC 11469, Y. intermedia, strain 3953, strain Bottone 48, strain Chester 48
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